Table 3. Photosynthesis and respiration. Highly expressed ORFs involved in photosynthesis or respiration. Expression levels are at least 30x above background (300). |
ORF |
Submetabolism |
Annotation |
+N |
-N |
p-value |
all0138 |
PS II |
CP47 protein |
13326 |
9658 |
0.3 |
all0259 |
PS II |
cytochrome c550 |
9311 |
13906 |
0.4 |
asr3845 |
PS II |
cytochrome b559 alpha subunit |
12527 |
10674 |
0.3 |
asr3846 |
PS II |
cytochrome b559 beta subunit |
7606 |
10848 |
0.5 |
alr3421 |
Cyt. b6/f |
Plastoquinol plastocyanin reductase, cytochrome b6; PetB |
16697 |
12112 |
0.03 |
alr3422 |
Cyt. b6/f |
Plastoquinol plastocyanin reductase, aposytochrome subunit 4; PetD |
9381 |
13981 |
0.03 |
all0109 |
PS I |
Subunit III precursor; PsaF |
19723 |
23286 |
0.007 |
all0107 |
PS I |
Subunit XI; PsaL |
18416 |
25334 |
0.04 |
all4121 |
Electron Carriers |
ferredoxin-NADP(+) reductase |
5205 |
12290 |
0.03 |
all4148 |
Electron Carriers |
ferredoxin I |
10984 |
14541 |
0.3 |
alr0021 |
Phycobilisome |
allophycocyanin alpha subunit; ApcA |
28417 |
24927 |
0.03 |
alr0022 |
Phycobilisome |
allophycocyanin beta subunit; ApcB |
25066 |
19930 |
0.2 |
alr0023 |
Phycobilisome |
core linker protein Lc7.8; ApcC |
13165 |
16575 |
0.2 |
alr0020 |
Phycobilisome |
core membrane linker protein; ApcE |
7285 |
18364 |
0.003 |
alr0529 |
Phycobilisome |
phycosyanin alpha chain; CpcA |
16927 |
18047 |
0.04 |
alr0528 |
Phycobilisome |
phycosyanin beta chain; CpcB |
20430 |
15579 |
0.4 |
alr0530 |
Phycobilisome |
phycosyanin associated rod linker protein CpcC |
13993 |
11404 |
0.1 |
alr0532 |
Phycobilisome |
phycocyanobilin Iyase alpha subunit; CpcE |
11497 |
18861 |
0.001 |
alr0524 |
Phycobilisome |
phycoerythrocyanin alpha chain; PecA |
11660 |
13985 |
0.2 |
alr0523 |
Phycobilisome |
phycoerythrocyanin beta chain; PecB |
22153 |
16828 |
0.1 |
alr0525 |
Phycobilisome |
phycoerythrocyanin associated rod linker protein PecC |
4337 |
12756 |
0.01 |
all1842 |
NADH |
NADH dehydrogenase |
2762 |
15611 |
0.004 |
all3840 |
NADH |
Chain J |
9877 |
14945 |
0.004 |
alr0225 |
NADH |
Subunit 6; NdhG |
8989 |
10480 |
0.002 |
alr0226 |
NADH |
Subunit 4L; NdhE |
9310 |
12526 |
0.004 |
alr3956 |
NADH |
Subunit 5 |
7635 |
12323 |
0.02 |
all0006 |
ATP Synthase |
Subunit delta; AtpD |
10175 |
10859 |
0.1 |
all0010 |
ATP Synthase |
Subunit a; AlpI |
15528 |
17750 |
0.03 |
all0011 |
ATP Synthase |
Subunit I; AtpI |
13805 |
13505 |
0.07 |
|