Table 3. Photosynthesis and respiration. Highly expressed ORFs involved in photosynthesis or respiration. Expression levels are at least 30x above background (300).


ORF

Submetabolism

Annotation

+N

-N

p-value

all0138

PS II

CP47 protein

13326

9658

0.3

all0259

PS II

cytochrome c550

9311

13906

0.4

asr3845

PS II

cytochrome b559 alpha subunit

12527

10674

0.3

asr3846

PS II

cytochrome b559 beta subunit

7606

10848

0.5

alr3421

Cyt. b6/f

Plastoquinol plastocyanin reductase, cytochrome b6; PetB

16697

12112

0.03

alr3422

Cyt. b6/f

Plastoquinol plastocyanin reductase, aposytochrome subunit 4; PetD

9381

13981

0.03

all0109

PS I

Subunit III precursor; PsaF

19723

23286

0.007

all0107

PS I

Subunit XI; PsaL

18416

25334

0.04

all4121

Electron Carriers

ferredoxin-NADP(+) reductase

5205

12290

0.03

all4148

Electron Carriers

ferredoxin I

10984

14541

0.3

alr0021

Phycobilisome

allophycocyanin alpha subunit; ApcA

28417

24927

0.03

alr0022

Phycobilisome

allophycocyanin beta subunit; ApcB

25066

19930

0.2

alr0023

Phycobilisome

core linker protein Lc7.8; ApcC

13165

16575

0.2

alr0020

Phycobilisome

core membrane linker protein; ApcE

7285

18364

0.003

alr0529

Phycobilisome

phycosyanin alpha chain; CpcA

16927

18047

0.04

alr0528

Phycobilisome

phycosyanin beta chain; CpcB

20430

15579

0.4

alr0530

Phycobilisome

phycosyanin associated rod linker protein CpcC

13993

11404

0.1

alr0532

Phycobilisome

phycocyanobilin  Iyase alpha subunit; CpcE

11497

18861

0.001

alr0524

Phycobilisome

phycoerythrocyanin alpha chain; PecA

11660

13985

0.2

alr0523

Phycobilisome

phycoerythrocyanin beta chain; PecB

22153

16828

0.1

alr0525

Phycobilisome

phycoerythrocyanin associated rod linker protein PecC

4337

12756

0.01

all1842

NADH

NADH dehydrogenase

2762

15611

0.004

all3840

NADH

Chain J

9877

14945

0.004

alr0225

NADH

Subunit 6; NdhG

8989

10480

0.002

alr0226

NADH

Subunit 4L; NdhE

9310

12526

0.004

alr3956

NADH

Subunit 5

7635

12323

0.02

all0006

ATP Synthase

Subunit delta; AtpD

10175

10859

0.1

all0010

ATP Synthase

Subunit a; AlpI

15528

17750

0.03

all0011

ATP Synthase

Subunit I; AtpI

13805

13505

0.07


Supported by UNESCO / MIRCEN network