Molecular Biology and Genetics
 

Animal Biotechnology

Electronic Journal of Biotechnology ISSN: 0717-3458 Vol. 11 No. 3, Issue of July 15, 2008
© 2008 by Pontificia Universidad Católica de Valparaíso -- Chile Received November 19, 2007 / Accepted March 14, 2008
DOI: 10.2225/vol11-issue3-fulltext-11
RESEARCH ARTICLE

Genetic polymorphism of the αs1-casein locus in five populations of goats from Mexico

José Antonio Torres-Vázquez
Departamento de Genética y Bioestadística
Facultad de Medicina Veterinaria y Zootecnia
Universidad Nacional Autónoma de México
Ciudad Universitaria, México 04510, D.F., México
Tel: 52 55 56 22 5894
Fax: 52 55 5622 5956
E-mail: antonio.tv@correo.unam.mx

Felícitas Vázquez Flores
Escuela de Medicina Veterinaria y Zootecnia
Benemérita Universidad Autónoma de Puebla
4 Sur No. 304 col. Centro. 75482, Tecamachalco, Puebla
Tel: 52 249 422 01 78
Fax: 52 249 422 01 78
E-mail: fvazquez_6@yahoo.com

Hugo H. Montaldo*
Departamento de Genética y Bioestadística
Facultad de Medicina Veterinaria y Zootecnia
Universidad Nacional Autónoma de México
Ciudad Universitaria, México 04510, D.F., México
Tel: 52 55 56 22 5894
Fax: 52 55 5622 5956
E-mail: montaldo@servidor.unam.mx

Raúl Ulloa-Arvizu
Departamento de Genética y Bioestadística
Facultad de Medicina Veterinaria y Zootecnia
Universidad Nacional Autónoma de México
Ciudad Universitaria, México 04510, D.F., México
Tel: 52 55 56 22 5894
Fax: 52 55 5622 5956
E-mail: ulloar@servidor.unam.mx

Mauricio Valencia Posadas
Instituto de Ciencias Agrícolas
Universidad de Guanajuato
Ex-Hacienda El Copal, AP 311 Irapuato Guanajuato
CP 36500, México
Tel: 52 46 2624 1889
Fax: 52 46 2624 8678
E-mail: posadas@dulcinea.ugto.mx

Amanda Gayosso Vázquez
Departamento de Genética y Bioestadística
Facultad de Medicina Veterinaria y Zootecnia
Universidad Nacional Autónoma de México
Ciudad Universitaria, México 04510, D.F., México
Tel: 52 55 56 22 5894
Fax: 52 55 5622 5956
E-mail: amandagv66@hotmail.com

Rogelio Alejandro Alonso Morales
Departamento de Genética y Bioestadística
Facultad de Medicina Veterinaria y Zootecnia
Universidad Nacional Autónoma de México
Ciudad Universitaria, México 04510, D.F., México
Tel: 52 55 56 22 5894
Fax: 52 55 5622 5956
E-mail: ralonsom@servidor.unam.mx

*Corresponding author

Financial support: This study was supported by grant SAGARPA 2003-152 by the National Council of Science and Technology (CONACYT), Mexico.

Keywords: CSN1S1, gene frequencies, genetic diversity, goat milk, PCR-RFLP.

 

Abbreviations:

CSN1S1: αs1-Casein
FIS: subpopulation inbreeding coefficient
FIT: overall inbreeding coefficient
FST: degree of genetic differentiation of subpopulations
GAS: Gene-Assisted Selection
Ho: observed heterozygosity
Hs: expected heterozygosity
HWE: Hardy-Weinberg Equilibrium
LINE: Long Interspersed Nuclear Element
ne: effective number of alleles
PCR: Polymerase Chain Reaction

Abstract   Full Text

With the objective of estimating allele frequencies, and testing for population divergence for the CSN1S1 locus, genotypes of animals from five goat populations; Saanen (n = 97), Alpine (n = 81) Toggenburg (n = 92), local goats with external appearance similar to the Murciana-Granadina breed from Central Mexico (n = 26) and heterogeneous local animals denominated Mosaico Lagunero (n = 30), from Northern Mexico, were identified using PCR and Xmn1 PCR-RFLP methodology. For Saanen, Alpine and Toggenburg, the sum of E and F alleles had the largest frequencies (from 0.468 to 0.789), while for the groups local Murciana-Granadina and Mosaico Lagunero the sum of the most frequent allelic groups (A* and B*), were 0.385 and 0.533 respectively. Both local Murciana-Granadina and Mosaico Lagunero populations showed heterozygote excess (P < 0.08). The percentage of the total genetic variation (FST) explained by population differences was 5.16. There was genetic differentiation for most pair comparisons between populations (P < 0.05), excepting for Alpine versus Toggenburg, and Toggenburg versus Mosaico Lagunero (P > 0.05). For Saanen and Alpine the frequencies of alleles E and F were similar to the same breeds previously analyzed in Europe. Therefore there are opportunities of increasing the frequency of the strong alleles for protein content Gene Assisted Selection (GAS) in these two breeds. For Toggenburg the most frequent allelic groups were F (0.32) and B* (0.21). Results indicate differentiation between most populations for this locus. Moreover, heterozygote excess in local populations indicated breed admixture.

Supported by UNESCO / MIRCEN network