Plant Biotechnology

Electronic Journal of Biotechnology ISSN: 0717-3458 Vol. 11 No. 4, Issue of October 15, 2008
© 2008 by Pontificia Universidad Católica de Valparaíso -- Chile Received March 11, 2008 / Accepted May 22, 2008
DOI: 10.2225/vol11-issue4-fulltext-13
TECHNICAL NOTE

Isolation of functional total RNA from Argemone mexicana tissues

Jorge A. Rubio-Piña
Unidad de Bioquímica y Biología Molecular de Plantas
Programa de Posgrado en Ciencias y Biotecnología de Plantas
Centro de Investigación Científica de Yucatán
Calle 43 No. 130, Colonia Chuburná de Hidalgo
Mérida, Yucatán, México.
Fax: 999 981 3900
E-mail: jrubio@cicy.mx 

Felipe A. Vázquez-Flota*
Unidad de Bioquímica y Biología Molecular de Plantas
Centro de Investigación Científica de Yucatán
Calle 43 No. 130, Colonia Chuburná de Hidalgo
Mérida 97200, Yucatán, México
Tel: 999 942 8330
Fax: 999 981 3900
E-mail: felipe@cicy.mx

*Corresponding author

Financial support: National Council for Science and Technology (CONACYT), Mexico.

Keywords: Argemone mexicana, plant tissues, RNA isolation, secondary metabolites.

Abbreviations:

CTAB: hexadecyltrimethylammonium bromide
DEPC: diethyl pyrocarbonate
PVPP: polyvinylpolypyrrolidone
RT-PCR: reverse transcription polymerase chain reaction
SDS: sodium dodecyl sulfate

Abstract   Full Text

RNA extraction from recalcitrant plant tissues is frequently complicated by the presence of secondary metabolites, polysaccharides and polyphenols. These compounds may co precipitate with RNA, often rendering it unsuitable for either cDNA synthesis or hybridization in northern blot analyses and therefore, interfering with the gene analysis expression in such tissues. We have developed an efficient RNA extraction method from A. mexicana tissues. The procedure includes the use of polyvinylpolypyrrolidone (PVPP), to remove secondary metabolites, proteins and polyphenols, and a two-step precipitation with LiCl, to eliminate polysaccharides, and thus increasing RNA yield. The quality of the resulting RNA was evaluated spectrophotometrically and by agarose gel electrophoresis. Moreover, the RNA obtained by this method, could be used directly for both RT-PCR and northern blot analysis, without any further purification.

Supported by UNESCO / MIRCEN network