Table 2. List of the 48 simple sequence repeat (SSR) markers used in this study. |
Locus |
Chr. |
Repeat Motif |
PRIMER F |
PRIMER R |
RM110 |
2 |
(GA)15 |
TCGAAGCCATCCACCAACGAAG |
TCCGTACGCCGACGAGGTCGAG |
RM129 |
1 |
(CGG)8 |
TCTCTCCGGAGCCAAGGCGAGG |
CGAGCCACGACGCGATGTACCC |
RM134 |
7 |
(CCA)7 |
ACAAGGCCGCGAGAGGATTCCG |
GCTCTCCGGTGGCTCCGATTGG |
RM144 |
11 |
(ATT)11 |
TGCCCTGGCGCAAATTTGATCC |
GCTAGAGGAGATCAGATGGTAGTGCATG |
RM148 |
3 |
(TG)12 |
ATACAACATTAGGGATGAGGCTGG |
TCCTTAAAGGTGGTGCAATGCGAG |
RM165 |
1 |
(CT)13 |
CCGAACGCCTAGAAGCGCGTCC |
CGGCGAGGTTTGCTAATGGCGG |
RM169 |
5 |
GA)12 |
TGGCTGGCTCCGTGGGTAGCTG |
TCCCGTTGCCGTTCATCCCTCC |
RM174 |
2 |
(AGG)7(GA)10 |
AGCGACGCCAAGACAAGTCGGG |
TCCACGTCGATCGACACGACGG |
RM179 |
12 |
(TG)7 |
CCCCATTAGTCCACTCCACCACC |
CCAATCAGCCTCATGCCTCCCC |
RM186 |
3 |
(CGG)5 |
TCCTCCATCTCCTCCGCTCCCG |
GGGCGTGGTGGCCTTCTTCGTC |
RM188 |
5 |
(CA)8 |
TCCGCCTCTCCTCTCGCTTCCC |
GCAACGCACAACCGAACCGAGC |
RM206 |
11 |
(CT)21 |
CCCATGCGTTTAACTATTCT |
CGTTCCATCGATCCGTATGG |
RM212 |
1 |
(CT)24 |
CCACTTTCAGCTACTACCAG |
CACCCATTTGTCTCTCATTATG |
RM216 |
10 |
(CT)18 |
GCATGGCCGATGGTAAAG |
TGTATAAAACCACACGGCCA |
RM239 |
10 |
(AG)5TG(AG)2 |
TACAAAATGCTGGGTACCCC |
ACATATGGGACCCACCTGTC |
RM262 |
2 |
(CT)16 |
CATTCCGTCTCGGCTCAACT |
CAGAGCAAGGTGGCTTGC |
RM263 |
2 |
(CT)34 |
CCCAGGCTAGCTCATGAACC |
GCTACGTTTGAGCTACCACG |
RM272 |
1 |
(GA)9 |
AATTGGTAGAGAGGGGAGAG |
ACATGCCATTAGAGTCAGGC |
RM286 |
11 |
(GA)16 |
GGCTTCATCTTTGGCGAC |
CCGGATTCACGAGATAAACTC |
RM296 |
9 |
(GA)10 |
CACATGGCACCAACCTCC |
GCCAAGTCATTCACTACTCTGG |
RM30 |
6 |
(AG)9A(GA)12 |
GGTTAGGCATCGTCACGG |
TCACCTCACCACACGACACG |
RM300 |
2 |
(GTT)14 |
GCTTAAGGACTTCTGCGAACC |
CAACAGCGATCCACATCATC |
RM338 |
3 |
(CTT)6 |
CACAGGAGCAGGAGAAGAGC |
GGCAAACCGATCACTCAGTC |
RM402 |
6 |
(ATA)7 |
GAGCCATGGAAAGATGCATG |
TCAGCTGGCCTATGACAATG |
RM408 |
8 |
(CT)13 |
CAACGAGCTAACTTCCGTCC |
ACTGCTACTTGGGTAGCTGACC |
RM411 |
3 |
(GTT)7 |
ACACCAACTCTTGCCTGCAT |
TGAAGCAAAAACATGGCTAGG |
RM414 |
1 |
(TGCA)6 |
ATTGCAGTCATGCAGCAGTC |
ATATCTCCAATGTGGCAGGG |
RM436 |
7 |
(TAA)6 |
ATTCCTGCAGTAAAGCACGG |
CTTCGTGTACCTCCCCAAAC |
RM441 |
11 |
(AG)13 |
ACACCAGAGAGAGAGAGAGAGAG |
TCTGCAACGGCTGATAGATG |
RM453 |
12 |
(TC)10 |
CGCATCTCTCTCCCTTATCG |
CTCTCCTCCTCGTTGTCGTC |
RM471 |
4 |
(GA)12 |
ACGCACAAGCAGATGATGAG |
GGGAGAAGACGAATGTTTGC |
RM477 |
8 |
(AATT)5 |
TCTCGCGGTATAGTTTGTGC |
ACCACTACCAGCAGCCTCTG |
RM494 |
6 |
(AGA)16 |
GGGAGGGGATCGAGATAGAC |
TTTAACCTTCCTTCCGCTCC |
RM495 |
1 |
(CTG)7 |
AATCCAAGGTGCAGAGATGG |
CAACGATGACGAACACAACC |
RM507 |
5 |
(AAGA)7 |
CTTAAGCTCCAGCCGAAATG |
CTCACCCTCATCATCGCC |
RM508 |
6 |
(AG)17 |
GGATAGATCATGTGTGGGGG |
ACCCGTGAACCACAAAGAAC |
RM517 |
3 |
(CT)15 |
GGCTTACTGGCTTCGATTTG |
CGTCTCCTTTGGTTAGTGCC |
RM519 |
12 |
(AAG)8 |
AGAGAGCCCCTAAATTTCCG |
AGGTACGCTCACCTGTGGAC |
RM542 |
7 |
(CT)22 |
TGAATCAAGCCCCTCACTAC |
CTGCAACGAGTAAGGCAGAG |
RM547 |
8 |
(ATT)19 |
TAGGTTGGCAGACCTTTTCG |
GTCAAGATCATCCTCGTAGCG |
RM551 |
4 |
(AG)18 |
AGCCCAGACTAGCATGATTG |
GAAGGCGAGAAGGATCACAG |
RM556 |
8 |
(CCAG)6 |
ACTCCAAACCTCACTGCACC |
TAGCACACTGAACAGCTGGC |
RM559 |
4 |
(AACA)6 |
ACGTACACTTGGCCCTATGC |
ATGGGTGTCAGTTTGCTTCC |
RM560 |
7 |
(CT)12 |
GCAGGAGGAACAGAATCAGC |
AGCCCGTGATACGGTGATAG |
RM590 |
10 |
(TCT)10 |
CATCTCCGCTCTCCATGC |
GGAGTTGGGGTCTTGTTCG |
RM598 |
5 |
(GCA)9 |
GAATCGCACACGTGATGAAC |
ATGCGACTGATCGGTACTCC |
RM6 |
2 |
(AG)16 |
GTCCCCTCCACCCAATTC |
TCGTCTACTGTTGGCTGCAC |
RM60 |
3 |
(AATT)5AATCT(AATT) |
AGTCCCATGTTCCACTTCCG |
ATGGCTACTGCCTGTACTAC |
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