Table 1. Percentage of GC (%GC), total amplified fragments (AF), polymorphic fragments (PF), percentage of polymorphism (%P) and resolving power (Rp) for each RAPD primer used. |
Primer |
%GC |
AF |
PF |
%P |
Rp |
Y24* |
70 |
8 |
6 |
75 |
1.6 |
Y29* |
70 |
10 |
10 |
100 |
5.1 |
Y37* |
70 |
3 |
2 |
66.6 |
0.9 |
Y38* |
70 |
15 |
15 |
100 |
7.5 |
Y41* |
80 |
8 |
8 |
100 |
3.3 |
Average |
72 |
8.8 |
8.2 |
93.1 |
3.6 |
P619** |
66 |
13 |
13 |
100 |
5.8 |
P625** |
66 |
8 |
6 |
75 |
2.6 |
P628** |
60 |
4 |
3 |
75 |
1.3 |
P635** |
73 |
17 |
17 |
100 |
8.9 |
P647** |
60 |
13 |
13 |
100 |
6.4 |
Average |
65 |
11 |
10.4 |
94.5 |
5 |
P495*** |
60 |
11 |
10 |
90.9 |
3.9 |
P496*** |
60 |
6 |
5 |
83.3 |
2.6 |
P497*** |
60 |
8 |
8 |
100 |
3.8 |
P498*** |
60 |
12 |
12 |
100 |
4.9 |
P500*** |
60 |
10 |
10 |
100 |
3.8 |
Average |
60 |
9.4 |
9 |
95.7 |
3.8 |
*10 base (Yamagishi, 1995). **15 base (Yamagishi et al. 2002). ***20 base (Debener and Mattiesch, 1998). |
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