Table 2. DNA amplification in different mango ginger (C. amada) by neutral and functional markers. |
Primer-pairs/combinations |
Annealing temp.(°C) |
Total bands (Polymorphic) |
Polymorphism (%) |
Average band (No.) |
PBA markers1 |
||||
CYP1A1F/heme2B6 |
56 |
14 (14) |
100 |
3.9 |
CYP2C19F/CYP1A1R |
56 |
12(12) |
100 |
3.6 |
CYP2C19F/heme2B6 |
52 |
9(9) |
100 |
4.3 |
CYP2C19F/heme2C19 |
56 |
5(3) |
60 |
3.1 |
CYP1A1F/CYP2B6R |
56 |
18(18) |
100 |
6.8 |
CYP2B6F/CYP1A1R |
52 |
24(24)s |
100 |
7 |
CYP2B6F/CYP2B6R |
52 |
22(22) |
100 |
7.8 |
CYP2B6F/heme2B6 |
52 |
8(7) |
87.5 |
3.6 |
CYP2B6Fheme2C19 |
52 |
14(14) |
100 |
4.7 |
CYP1A1FCYP2C19R |
46.5 |
10(10) |
100 |
2.2 |
CYP2B6F/CYP2C19R |
46.5 |
8(7) |
87.5 |
2.3 |
CYP2C19F/CYP2C19R |
46.5 |
15(15) |
100 |
5.6 |
Average |
|
13.3(12.9) |
94.58 |
4.6 |
RSB-RAPD markers2 |
||||
RM1 |
55 |
14(11) |
79 |
5.4 |
RM125 |
55 |
24(24) |
100 |
10.4 |
RM171 |
55 |
17(14) |
82 |
7.5 |
RM153 |
55 |
19(18) |
95 |
6.6 |
RM154 |
60 |
17(17) |
100 |
8 |
RM135 |
63 |
14(11) |
79 |
7.1 |
RM131 |
60 |
16(16) |
100 |
10.9 |
RM117 |
60 |
25(25) |
100 |
8.8 |
Average |
|
18.3(17) |
91.88 |
8.1 |
|