Table 1. BLASTX sequence similarities and GO classification of sunflower EST-SSRs included in the genetic map.



Sequence name

Putative function

Hit description

Hit ACC

E-value

GO/EC code

GO Terms

LG

TC18146

leucine
zipper

gi|38503523|gb|AAR20445.2|
putative leucine zipper protein
 [Gossypium hirsutum]

AAR20445

0

GO:0048529
GO:0009706
GO:0009535
GO:0015979
GO:0015995
GO:0055114
GO:0046914
EC:1.14.13.81

magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase activity; chloroplast inner membrane; chloroplast thylakoid membrane; photosynthesis; chlorophyll biosynthetic process; oxidation reduction; transition metal ion binding

10

TC18194

protein
kinase

gi|224117232|ref|XP_002331754.1|
predicted protein [Populus trichocarpa] >gi|222874451|gb|EEF11582.1|
predicted protein [Populus trichocarpa]

XP_002331754

2,66e-036

GO:0004672

protein kinase activity

  3

TC21689

glycine-rich
protein

gi|195648068|gb|ACG43502.1|
glycine-rich protein 2b [Zea mays]

ACG43502

7,55e-006

  4

TC23602

CDPK-related protein kinase

gi|195616300|gb|ACG29980.1|
CDPK-related protein kinase
[Zea ays]

ACG29980

1,61e-023

GO:0006468
GO:0005509
GO:0005524
GO:0004674
EC:2.7.11.0

 

protein amino acid phosphorylation;
calcium ion binding; ATP binding;
protein serine/threonine kinase activity

  8

TC23762

zinc ring-type

gi|225449738|ref|XP_002270953.1|
predicted: hypothetical protein
[Vitis vinifera]
 >gi|157354027|emb|CAO46568.1|
unnamed protein product [Vitis vinifera]

XP_002270953

2,37e-037

GO:0005515
GO:0008270

protein binding;
zinc ion binding

 

14

TC24992

hypothetical
protein

gi|189242004|ref|XP_001807057.1|
predicted: hypothetical protein, partial
 [Tribolium castaneum]

XP_001807057

5,72e-006

  8

TC25054

ferredoxin precursor

gi|37779195|gb|AAO42615.1|
ferredoxin  [Helianthus annuus]

AAO42615

4,02e-036

GO:0005515
GO:0009055
GO:0051536
GO:0022900
GO:0006118

protein binding; electron carrier activity; iron-sulfur cluster binding; electron transport chain; electron transport

 

16

TC26323

photosystem II

gi|255543290|ref|XP_002512708.1|
Photosystem II 11 kDa protein
recursor, putative [Ricinus communis]
gi|223548669|gb|EEF50160.1|

Photosystem II 11 kDa protein precursor, putative [Ricinus communis]

XP_002512708

1,27e-034

GO:0030095
GO:0009543

chloroplast photosystem II;
chloroplast thylakoid lumen

 

17

TC26869

DNAJ heat shock
n-terminal domain-containing protein

gi|211953609|gb|ACJ13966.1|
DNAJ heat shock N-terminal domain-
containing protein
[Helianthus annuus]

ACJ13966

4,05e-035

16

 


Supported by UNESCO / MIRCEN network