Fig. 5 Transcriptome profiling by Real-Time PCR.
(a) Transcriptome profiling of CpEXPA1, CpEXPA2, CpEXPA3 and CpEXPA4 in C. procera roots, stem, fibers and leaves by real time RT-PCR using equalization of unit mass method.
(b) Relative fold expression was determined by built-in software package of BioRad iQ5 thermal cycler. Relative quantification of transcriptome was determined by plotting the 2ΔCt values on Y-axis against different tissues of C. procera.
(c) Lane 1-4: 1% agarose gel containing equalized concentration of RNA isolated from root, stem, fiber and leave tissues respectively for their usage in the subsequent cDNA synthesis and real time PCR.
(d) Lane 1-4: PCR amplification of 18srRNA gene in roots, stem, fibers and leaves respectively to equalize the amount of cDNA for normalization of the assay against unit mass.
(e) Lane 1-4: PCR amplification of β-Tubulin gene in roots, stem, fibers and leaves respectively to equalize the amount of cDNA for normalization of the assay against unit mass.


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