|
| Table 3. Signal peptide and significant transmembrane regions in the deduced amino acid sequence of CpEXPA1, CpEXPA2, CpEXPA3 and CpEXPA4. |
|
Cleavages site probability |
Predicted signal peptide length (a.a) |
Predicted cleavage site in the amino acid sequence |
Significant transmembrane |
CpEXPA1 |
0.963 |
22 |
|
17-36 (20) |
CpEXPA2 |
0.993 |
26 |
|
2-24 (23) |
CpEXPA3 |
0.992 |
24 |
|
1-19 (19) |
CpEXPA4 |
0.858 |
17 |
|
1-20 (20) |
Signal peptide was determined by applying Neural Network (NN) and Hidden Markov Model (HMM) trained on eukaryotes available at http://www.cbs.dtu.dk/services/SignalP/ and transmembrane segments were identified by TMpred available at http://www.ch.embnet.org/software/TMPRED. |
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