Table 1. Information on eight SSRs characterized in Corchorus spp. to assess the quality and performance of the DNA extracted from leaves and seeds using two different DNA minipreps. |
Accession no. |
nSSR motif |
Primer sequence 5’ - 3’ |
Allele size (bp) |
Ta (ºC) |
MJM 432 |
(ac)8 |
CAAGCTTCTGCAGGTATGCTC |
186 |
57 |
MJM 513 |
(ac)12 |
TCTTGTGCCAAGGTATCCATC |
356 |
56 |
MJM 519 |
(gt)6 |
AGCATGCTAACTTGAAGACGC |
182 |
56 |
MJM 561 |
(gt)16 |
AGTGCAAACACGAGAGCAAAT |
311 |
56 |
MJM 615 |
(tc)15 |
AGGATCCATGGGAAATAATCG |
218 |
56 |
MJM 623 |
(ct)16 |
TTCTGCAGTTGTCTCCCTGTT |
319 |
56 |
MJM 630 |
(ta)9 |
AGAACACGTTCACCAGACAGC |
389 |
57 |
MJM 652 |
(tc)23 |
ATTCTTAGATCCGGCCATGTT |
236 |
56 |
MJM (Meerut jute microsatellites). |
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