Table 1. | Combinations of transcription factor binding sites for C. elegans, human chromosome 22, yeast, archaea, bacteria, and virus. |
Genome Name |
Total Repeat Sequences |
Match One |
No Match |
More Than One Match |
Average Factors |
Ratio |
C. elegans |
454927 |
73881 |
29962 |
351084 |
4.8 |
77.17% |
Human chromosome 22 |
1347364 |
47159 |
22211 |
1277994 |
7.6 |
94.85% |
Yeast |
4329 |
305 |
338 |
3686 |
22.5 |
85.14% |
Bsub |
700 |
73 |
27 |
600 |
11.5 |
85.71% |
Hinf |
788 |
93 |
55 |
640 |
7.3 |
81.22% |
Hpyl |
713 |
98 |
25 |
590 |
8.3 |
82.75% |
Hpyl99 |
721 |
88 |
33 |
600 |
6.3 |
83.22% |
Mgen |
373 |
26 |
16 |
331 |
6.7 |
88.74% |
Mtub |
4932 |
784 |
171 |
3977 |
5.1 |
80.64% |
E. coli |
1897 |
188 |
60 |
1649 |
8.8 |
86.93% |
CP |
135 |
14 |
8 |
113 |
7.3 |
83.70% |
MP |
1282 |
107 |
36 |
1139 |
7.5 |
88.85% |
RP |
98 |
8 |
2 |
88 |
5.8 |
89.80% |
TP |
102 |
7 |
4 |
91 |
15.3 |
89.22% |
AP |
398 |
62 |
7 |
329 |
7.4 |
82.66% |
AR |
779 |
48 |
21 |
710 |
7.8 |
91.42% |
PA |
277 |
20 |
4 |
253 |
5.1 |
91.34% |
PH |
401 |
17 |
4 |
380 |
6.5 |
94.76% |
AA |
299 |
20 |
7 |
272 |
6.9 |
90.97% |
CT |
27 |
4 |
1 |
22 |
14.5 |
81.48% |
S |
1580 |
78 |
34 |
1468 |
9.1 |
92.91% |
TM |
518 |
24 |
14 |
480 |
7.0 |
92.66% |
UU |
302 |
31 |
9 |
262 |
6.2 |
86.75% |
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