Table 2. Summary of the SSR by nucleotide group with the SSR units in the group with minimum 10 bp.

Group

SSR Count

SSR Units in Group

AC

89

AC CA GT TG

AG

828

AG CT GA TC

AT

371

AT TA

CG

2

CG GC

AAC

721

AAC ACA CAA GTT TGT TTG

AAG

2067

AAG AGA CTT GAA TCT TTC

AAT

364

AAT ATA ATT TAA TAT TTA

ACC

462

ACC CAC CCA GGT GTG TGG

ACG

508

ACG AGC CAG CGA CGT CTG GAC GCA GCT GTC TCG TGC

ACT

809

ACT AGT ATC ATG CAT CTA GAT GTA TAC TAG TCA TGA

AGG

196

AGG CCT CTC GAG GGA TCC

CCG

83

CCG CGC CGG GCC GCG GGC

AAAC

73

AAAC AACA ACAA CAAA GTTT TGTT TTGT TTTG

AAAG

141

AAAG AAGA AGAA CTTT GAAA TCTT TTCT TTTC

AAAT

172

AAAT AATA ATAA ATTT TAAA TATT TTAT TTTA

AACC

1

AACC ACCA CAAC CCAA GGTT GTTG TGGT TTGG

AACG

5

AACG AAGC ACGA AGCA CAAG CGAA CGTT CTTG GAAC GCAA GCTT GTTC TCGT TGCT TTCG TTGC

AACT

44

AACT AATC ACTA AGTT ATCA ATTG CAAT CTAA GATT GTTA TAAC TAGT TCAA TGAT TTAG TTGA

AAGG

39

AAGG AGGA CCTT CTTC GAAG GGAA TCCT TTCC

AAGT

80

AAGT AATG ACTT AGTA ATGA ATTC CATT CTTA GAAT GTAA TAAG TACT TCAT TGAA TTAC TTCA

AATT

123

AATT ATTA TAAT TTAA

ACAG

44

ACAG AGAC CAGA CTGT GACA GTCT TCTG TGTC

ACAT

56

ACAT ATAC ATGT CATA GTAT TACA TATG TGTA

ACCC

2

ACCC CACC CCAC CCCA GGGT GGTG GTGG TGGG

ACCT

3

ACCT AGGT ATCC ATGG CATC CCAT CCTA CTAC GATG GGAT GGTA GTAG TACC TAGG TCCA TGGA

ACGC

1

ACGC CACG CGCA CGTG GCAC GCGT GTGC TGCG

ACGG

2

ACGG AGGC CAGG CCGT CCTG CGGA CGTC CTGC GACG GCAG GCCT GGAC GGCA GTCC TCCG TGCC

ACGT

24

ACGT ATGC CATG CGTA GCAT GTAC TACG TGCA

ACTC

37

ACTC AGTG CACT CTCA GAGT GTGA TCAC TGAG

AGAT

47

AGAT ATAG ATCT CTAT GATA TAGA TATC TCTA

AGCG

1

AGCG CGAG CGCT CTCG GAGC GCGA GCTC TCGC

AGCT

9

AGCT ATCG CGAT CTAG GATC GCTA TAGC TCGA

AGGG

20

AGGG CCCT CCTC CTCC GAGG GGAG GGGA TCCC

CCCG

1

CCCG CCGC CGCC CGGG GCCC GCGG GGCG GGGC


Supported by UNESCO / MIRCEN network