Table 2. Summary of the SSR by nucleotide group with the SSR units in the group with minimum 10 bp.
Group |
SSR Count |
SSR Units in Group |
AC |
89 |
AC CA GT TG |
AG |
828 |
AG CT GA TC |
AT |
371 |
AT TA |
CG |
2 |
CG GC |
AAC |
721 |
AAC ACA CAA GTT TGT TTG |
AAG |
2067 |
AAG AGA CTT GAA TCT TTC |
AAT |
364 |
AAT ATA ATT TAA TAT TTA |
ACC |
462 |
ACC CAC CCA GGT GTG TGG |
ACG |
508 |
ACG AGC CAG CGA CGT CTG GAC GCA GCT GTC TCG TGC |
ACT |
809 |
ACT AGT ATC ATG CAT CTA GAT GTA TAC TAG TCA TGA |
AGG |
196 |
AGG CCT CTC GAG GGA TCC |
CCG |
83 |
CCG CGC CGG GCC GCG GGC |
AAAC |
73 |
AAAC AACA ACAA CAAA GTTT TGTT TTGT TTTG |
AAAG |
141 |
AAAG AAGA AGAA CTTT GAAA TCTT TTCT TTTC |
AAAT |
172 |
AAAT AATA ATAA ATTT TAAA TATT TTAT TTTA |
AACC |
1 |
AACC ACCA CAAC CCAA GGTT GTTG TGGT TTGG |
AACG |
5 |
AACG AAGC ACGA AGCA CAAG CGAA CGTT CTTG GAAC GCAA GCTT GTTC TCGT TGCT TTCG TTGC |
AACT |
44 |
AACT AATC ACTA AGTT ATCA ATTG CAAT CTAA GATT GTTA TAAC TAGT TCAA TGAT TTAG TTGA |
AAGG |
39 |
AAGG AGGA CCTT CTTC GAAG GGAA TCCT TTCC |
AAGT |
80 |
AAGT AATG ACTT AGTA ATGA ATTC CATT CTTA GAAT GTAA TAAG TACT TCAT TGAA TTAC TTCA |
AATT |
123 |
AATT ATTA TAAT TTAA |
ACAG |
44 |
ACAG AGAC CAGA CTGT GACA GTCT TCTG TGTC |
ACAT |
56 |
ACAT ATAC ATGT CATA GTAT TACA TATG TGTA |
ACCC |
2 |
ACCC CACC CCAC CCCA GGGT GGTG GTGG TGGG |
ACCT |
3 |
ACCT AGGT ATCC ATGG CATC CCAT CCTA CTAC GATG GGAT GGTA GTAG TACC TAGG TCCA TGGA |
ACGC |
1 |
ACGC CACG CGCA CGTG GCAC GCGT GTGC TGCG |
ACGG |
2 |
ACGG AGGC CAGG CCGT CCTG CGGA CGTC CTGC GACG GCAG GCCT GGAC GGCA GTCC TCCG TGCC |
ACGT |
24 |
ACGT ATGC CATG CGTA GCAT GTAC TACG TGCA |
ACTC |
37 |
ACTC AGTG CACT CTCA GAGT GTGA TCAC TGAG |
AGAT |
47 |
AGAT ATAG ATCT CTAT GATA TAGA TATC TCTA |
AGCG |
1 |
AGCG CGAG CGCT CTCG GAGC GCGA GCTC TCGC |
AGCT |
9 |
AGCT ATCG CGAT CTAG GATC GCTA TAGC TCGA |
AGGG |
20 |
AGGG CCCT CCTC CTCC GAGG GGAG GGGA TCCC |
CCCG |
1 |
CCCG CCGC CGCC CGGG GCCC GCGG GGCG GGGC |
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