Table 1. Summary of results from RNA extractions. Total time = includes Percoll cell isolation (if required), RNA isolation, DNase treatment if needed, and analysis by spectrophotometry and gel electrophoresis. n = 4, * n = 3, # n = 2 |
Method |
Sample |
RNA yield |
A260:A280 |
Bench time (hr) |
Total time (hr) |
RNeasy |
P. elisabethae frozen |
0.055 |
1.39 |
1 hr |
3 hrs |
Trizol |
P. elisabethae frozen |
1.039 |
2.33 |
6 hrs |
9 hrs |
RNeasy |
P. elisabethae live |
0.228 |
2.15 |
1 hrs |
3 hrs |
Trizol |
P. elisabethae live |
0.536 |
2.46 |
6 hrs |
9 hrs |
RNeasy |
Symbiodinium frozen |
2.693 x 10-7 |
1.55 |
1 hr |
8 hrs |
Trizol |
Symbiodinium frozen# |
1.178 x 10-6 |
2.42 |
6 hrs |
14 hrs |
RNeasy |
Symbiodinium live |
2.556 x 10-7 |
1.30 |
1 hr |
8 hrs |
Trizol |
Symbiodinium live* |
7.880 x 10-7 |
2.28 |
6 hrs |
14 hrs |
|